Add DDL-based DB init and bootstrap

Add bootstrap entrypoint and migrate DB schema setup to SQL files. Introduces bootstrap.js, many data/ddl/*.sql files, and a new runDDL() in modules/database.js (exports pool and runDDL). Remove legacy modules/databaseGlobals.js. Update repositories and code to use database.pool.query calls. Bump package version and set main to bootstrap.js. Clean up server.js to remove inline DB/cert init (now handled by bootstrap). Overall: refactor DB initialization to run ordered SQL DDL files and centralize startup logic.

server.js

@@ -3,22 +3,16 @@ const hpp = require("hpp")
 const app = express()
 const cors = require("cors")
 const path = require("node:path")
-const utils = require("./modules/utils")
 const logger = require("./modules/logger")
 const helmet = require("helmet")
 const loader = require("./modules/loader")
-const DefaultError = require("./errors/DefaultError")
 const path2regex = require("path-to-regexp")
-const databaseGlobals = require("./modules/databaseGlobals")
-const certificates = require("./modules/certificatesManager")
 const { ValidationError } = require("./errors/errors")
 const routes = loader.getRecursiveFiles(path.join(__dirname, "routes"))
 const schemas = loader.getRecursiveFiles(path.join(__dirname, "schemas"))
 
 const schemaRegistry = {}
 
-databaseGlobals.setupDatabase()
-certificates.setupKeys()
 
 app.use(hpp())
 app.use(helmet({